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Guides

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Home Guides Recipes API Reference Changelog Discussions

Introducing Pennsieve

Welcome!
How is Pennsieve used by scientists?
- Using Pennsieve for collaborative science
- Project spotlights
Workspace and User Management
- Overview of workspace and user management
- Workspace Feature Set
Dataset and File Management
Workflows and Integrations
- Overview of analytic workflows and infrastructure
- Workflow Feature Set
Pennsieve Repositories
Pennsieve Office Hours
Resources
- The Pennsieve Ontology Browser
- The Pennsieve CDE Catalog

Pennsieve Workspaces

Pennsieve web application
Datasets
- Files and Folders
- Metadata
Dataset configuration and settings
Interacting with scientific data
Collections

Pennsieve Repositories

Pennsieve Data Publishing
Pennsieve code publishing
Open data repositories
Interacting with public datasets
- Downloading a Public Dataset using AWS
- Accessing previous versions of public datasets
Pennsieve Dataset Submission Requirements

Pennsieve Analytics

Introduction to Pennsieve Analytics
Compute and Storage Resource
- How Pennsieve Accesses Your AWS Account
- Setup and Configuration
Compute Nodes
- LLM Access
- Environments & Layers
Interactive Notebooks
Workflows
- Workflow Parameters & Configuration Guide
- Cost estimates
Applications

Programmatic Access

Introduction to the Pennsieve API
The Pennsieve Agent
The Python Client
Direct Access Through AWS

Platform Integrations

ORCID
GitHub
Pennsieve Apps

Policies

Pennsieve Platform Preservation Commitment Statement
Pennsieve Terms of Service
Privacy Policy

Other

Pennsieve Compute Node — Security Review
Pennsieve Technology Stack
Troubleshooting Data Uploads
Pennsieve Funding Sources
Pennsieve Platform Security Overview

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Pennsieve Discover

Pennsieve Discover is a web application which provides access to all data published through Pennsieve

Screenshot of the Pennsieve Discover Web Application.

Updated 14 days ago

Common Dataset Licenses

Publishing under Embargo

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